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  • Negative cofitness for PP_2148 from Pseudomonas putida KT2440

    transcription-repair coupling factor
    SEED: Transcription-repair coupling factor
    KEGG: transcription-repair coupling factor (superfamily II helicase)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.72
    2 PP_1795 conserved protein of unknown function -0.71
    3 PP_4939 conserved protein of unknown function -0.62
    4 PP_1793 Glycosyl transferase, group 2 family protein -0.58
    5 PP_1370 Glycosyl transferase, group 1 family protein -0.56
    6 PP_1320 stringent starvation protein A -0.54
    7 PP_3957 choline/carnitine/betaine transporter BetTC -0.50
    8 PP_4978 conserved protein of unknown function -0.50
    9 PP_5064 choline dehydrogenase -0.49
    10 PP_0190 putative disulfide bond formation protein B -0.47
    11 PP_1369 conserved protein of unknown function -0.46
    12 PP_2852 putative Sulfatase domain protein -0.45
    13 PP_0439 conserved protein of unknown function -0.44
    14 PP_4710 tRNA pseudouridine 55 synthase -0.44
    15 PP_4859 Transcriptional regulator, TetR family -0.43
    16 PP_0247 Osmolarity sensor protein EnvZ -0.43
    17 PP_4653 adenine:H+ symporter -0.43
    18 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase -0.43
    19 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit -0.42
    20 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit -0.42

    Or look for positive cofitness