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  • Negative cofitness for PP_2146 from Pseudomonas putida KT2440

    helicase SNF2/RAD54 family
    SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0506 putative ABC efflux transporter, permease protein -0.27
    2 PP_3833 Response regulator -0.26
    3 PP_3957 choline/carnitine/betaine transporter BetTC -0.25
    4 PP_3663 GGDEF domain protein -0.24
    5 PP_0439 conserved protein of unknown function -0.24
    6 PP_3415 Transcriptional regulator, LacI family -0.24
    7 PP_4939 conserved protein of unknown function -0.24
    8 PP_2714 Sensor histidine kinase -0.23
    9 PP_5064 choline dehydrogenase -0.22
    10 PP_1328 Protein MraZ -0.22
    11 PP_4684 conserved protein of unknown function with kinase-like domain -0.22
    12 PP_5195 putative Iron ABC transporter, permease protein -0.22
    13 PP_4776 AsnC family transcriptional regulator -0.22
    14 PP_4978 conserved protein of unknown function -0.21
    15 PP_5236 conserved protein of unknown function -0.21
    16 PP_2348 Sensor histidine kinase -0.21
    17 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase -0.21
    18 PP_0662 putative Threonine synthase -0.21
    19 PP_1714 FKBP-type peptidyl-prolyl cis-trans isomerase -0.21
    20 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.21

    Or look for positive cofitness