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  • Negative cofitness for PP_2144 from Pseudomonas putida KT2440

    Transcriptional regulator, TetR family
    SEED: Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2326 Universal stress protein -0.40
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.37
    3 PP_3662 conserved protein of unknown function -0.31
    4 PP_4685 conserved protein of unknown function -0.28
    5 PP_5426 conserved protein of unknown function -0.28
    6 PP_5203 5-formyltetrahydrofolate cyclo-ligase -0.27
    7 PP_2436 Transcriptional regulator, LysR family -0.26
    8 PP_1301 quality control serine endoprotease DegS -0.26
    9 PP_0077 choline-sulfatase -0.24
    10 PP_3731 Transcriptional regulator, TetR family -0.24
    11 PP_1798 Outer membrane efflux protein -0.24
    12 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.23
    13 PP_1299 putative amino acid ABC transporter - membrane subunit -0.23
    14 PP_4164 Alpha/beta hydrolase -0.23
    15 PP_4781 Sensor histidine kinase -0.23
    16 PP_0740 Transcriptional regulator, MerR family -0.22
    17 PP_1627 conserved protein of unknown function -0.22
    18 PP_2335 methylcitrate synthase -0.22
    19 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.22
    20 PP_0029 two component heavy metal response regulator -0.22

    Or look for positive cofitness