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  • Negative cofitness for PP_1981 from Pseudomonas putida KT2440

    tRNA-dihydrouridine synthase C
    SEED: tRNA-dihydrouridine synthase C (EC 1.-.-.-)
    KEGG: tRNA-dihydrouridine synthase C

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.21
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.21
    3 PP_1072 Leucine-rich repeat domain protein -0.20
    4 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.19
    5 PP_1627 conserved protein of unknown function -0.19
    6 PP_5361 47 kDa protein -0.19
    7 PP_1918 septation protein -0.18
    8 PP_0016 conserved hypothetical protein -0.18
    9 PP_3627 conserved protein of unknown function -0.18
    10 PP_3567 Transcriptional regulator, LysR family -0.18
    11 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.18
    12 PP_3175 putative Dioxygenase, ferredoxin reductase component -0.17
    13 PP_4246 Periplasmic binding protein -0.17
    14 PP_2075 conserved membrane protein of unknown function -0.17
    15 PP_5136 ABC transporter, permease protein -0.17
    16 PP_0525 TonB-dependent receptor, B12 family -0.17
    17 PP_1626 DNA mismatch repair protein MutS -0.17
    18 PP_1650 Sensor protein GacS -0.17
    19 PP_0049 conserved protein of unknown function -0.16
    20 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.16

    Or look for positive cofitness