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  • Negative cofitness for PP_1946 from Pseudomonas putida KT2440

    Oxidoreductase, short chain dehydrogenase/reductase family
    SEED: oxidoreductase, short chain dehydrogenase/reductase family

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4371 two component system AtoC DNA-binding transcriptional activator -0.20
    2 PP_2357 putative Type 1 pili protein CsuB -0.20
    3 PP_4334 ParA family protein -0.18
    4 PP_4338 Chemotaxis histidine kinase CheA -0.18
    5 PP_2799 Aminotransferase, class III -0.18
    6 PP_0659 Cystathionine gamma-synthase -0.17
    7 PP_2185 putative Formate dehydrogenase, alpha subunit -0.17
    8 PP_2840 putative Membrane protein -0.17
    9 PP_4340 response regulator for chemotactic signal transduction -0.16
    10 PP_2365 Transcriptional regulator, AraC family -0.16
    11 PP_0610 conserved exported protein of unknown function -0.16
    12 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat -0.15
    13 PP_3090 OmpA domain protein -0.15
    14 PP_3095 Protein ClpV1 -0.15
    15 PP_3734 putative ABC transporter, permease protein -0.15
    16 PP_3096 conserved protein of unknown function -0.15
    17 PP_2752 conserved exported protein of unknown function -0.15
    18 PP_3349 3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter -0.15
    19 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease -0.15
    20 PP_4359 Flagellar protein FliL -0.15

    Or look for positive cofitness