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  • Negative cofitness for PP_1871 from Pseudomonas putida KT2440

    Protease HtpX
    SEED: Probable protease htpX homolog (EC 3.4.24.-)
    KEGG: heat shock protein HtpX

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.69
    2 PP_4939 conserved protein of unknown function -0.65
    3 PP_1795 conserved protein of unknown function -0.63
    4 PP_4978 conserved protein of unknown function -0.54
    5 PP_1370 Glycosyl transferase, group 1 family protein -0.54
    6 PP_5064 choline dehydrogenase -0.52
    7 PP_1793 Glycosyl transferase, group 2 family protein -0.52
    8 PP_3957 choline/carnitine/betaine transporter BetTC -0.51
    9 PP_0190 putative disulfide bond formation protein B -0.50
    10 PP_0247 Osmolarity sensor protein EnvZ -0.49
    11 PP_1320 stringent starvation protein A -0.49
    12 PP_0246 two-component system DNA-binding response transcriptional dual regulator -0.47
    13 PP_2852 putative Sulfatase domain protein -0.46
    14 PP_4722 Transcription elongation factor GreA -0.44
    15 PP_0439 conserved protein of unknown function -0.43
    16 PP_0498 conserved protein of unknown function -0.42
    17 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit -0.42
    18 PP_4710 tRNA pseudouridine 55 synthase -0.41
    19 PP_4653 adenine:H+ symporter -0.41
    20 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit -0.41

    Or look for positive cofitness