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  • Negative cofitness for PP_1713 from Pseudomonas putida KT2440

    Transcriptional regulator PcaQ
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, pca operon transcriptional activator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3651 Sensor histidine kinase/response regulator -0.27
    2 PP_3739 porin-like protein -0.25
    3 PP_5053 Protein-export protein SecB -0.23
    4 PP_2458 ribokinase -0.20
    5 PP_4171 conserved exported protein of unknown function -0.19
    6 PP_3160 conserved protein of unknown function -0.18
    7 PP_2387 conserved protein of unknown function -0.18
    8 PP_5200 proline aminopeptidase P II -0.17
    9 PP_3417 D-gluconate transporter -0.17
    10 PP_3546 Sensory box histidine kinase/response regulator -0.16
    11 PP_3695 conserved protein of unknown function -0.16
    12 PP_1281 Alginate lyase -0.15
    13 PP_4461 Major facilitator family transporter -0.15
    14 PP_4172 conserved exported protein of unknown function -0.15
    15 PP_4398 Major facilitator family transporter -0.14
    16 PP_3526 Transcriptional regulator, AraC family -0.14
    17 PP_3370 2-carboxybenzaldehyde reductase -0.14
    18 PP_5448 conserved protein of unknown function -0.14
    19 PP_0200 putative membrane bound peptidase, nefD -0.14
    20 PP_2140 conserved protein of unknown function -0.14

    Or look for positive cofitness