Negative cofitness for PP_1655 from Pseudomonas putida KT2440

23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KEGG: RNA methyltransferase, TrmA family

Computing cofitness values with 989 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_0498		conserved protein of unknown function	-0.60
2	PP_2379		putative cytochrome oxidase biogenesis protein	-0.59
3	PP_0496		Sodium/alanine symporter	-0.54
4	PP_4475		succinylglutamate desuccinylase	-0.52
5	PP_4379		Beta-ketoacyl-acyl-carrier-protein synthase I	-0.52
6	PP_4184		branched chain amino acid transporter	-0.48
7	PP_3415		Transcriptional regulator, LacI family	-0.47
8	PP_5064		choline dehydrogenase	-0.47
9	PP_4946		sodium/L-proline transporter	-0.47
10	PP_0984		conserved membrane protein of unknown function	-0.46
11	PP_0123		DNA polymerase I, 5	-0.46
12	PP_1319		Ubiquinol--cytochrome c reductase, cytochrome c1	-0.45
13	PP_0951		Ribosome hibernation promoting factor	-0.44
14	PP_1317		Ubiquinol-cytochrome c reductase iron-sulfur subunit	-0.44
15	PP_1318		Cytochrome b	-0.44
16	PP_0504		Outer membrane protein OprG	-0.44
17	PP_4250		cytochrome c oxidase subunit I, cbb3-type	-0.44
18	PP_4286		allantoinase	-0.44
19	PP_0594		Transcriptional regulator, TetR family	-0.43
20	PP_1646		putative Thioredoxin	-0.43

Or look for positive cofitness