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  • Negative cofitness for PP_1650 from Pseudomonas putida KT2440

    Sensor protein GacS
    SEED: BarA sensory histidine kinase (= VarS = GacS)
    KEGG: two-component system, NarL family, sensor histidine kinase BarA

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0498 conserved protein of unknown function -0.42
    2 PP_2379 putative cytochrome oxidase biogenesis protein -0.41
    3 PP_3957 choline/carnitine/betaine transporter BetTC -0.39
    4 PP_4946 sodium/L-proline transporter -0.39
    5 PP_4475 succinylglutamate desuccinylase -0.38
    6 PP_0439 conserved protein of unknown function -0.37
    7 PP_1786 putative Glycosyl transferase -0.37
    8 PP_5294 Ribonuclease PH -0.36
    9 PP_1793 Glycosyl transferase, group 2 family protein -0.34
    10 PP_0496 Sodium/alanine symporter -0.34
    11 PP_5064 choline dehydrogenase -0.33
    12 PP_2460 ribonucleoside hydrolase -0.33
    13 PP_1646 putative Thioredoxin -0.32
    14 PP_4482 Transcriptional regulator, AraC family -0.32
    15 PP_2449 conserved protein of unknown function -0.32
    16 PP_5259 Transcriptional regulator, LysR family -0.31
    17 PP_0594 Transcriptional regulator, TetR family -0.31
    18 PP_4859 Transcriptional regulator, TetR family -0.31
    19 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase -0.31
    20 PP_1795 conserved protein of unknown function -0.30

    Or look for positive cofitness