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  • Negative cofitness for PP_1498 from Pseudomonas putida KT2440

    putative Lipoprotein
    SEED: Putative lipoprotein, specific for Pseudomonas, in cluster with COG2110

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.24
    2 PP_5386 Probable copper RND efflux membrane fusion protein, CzcB family -0.23
    3 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.22
    4 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.22
    5 PP_1654 cysteine synthase B -0.20
    6 PP_2187 Universal stress protein family -0.20
    7 PP_2070 Transcriptional regulator, AraC family -0.20
    8 PP_5451 protein of unknown function -0.19
    9 PP_1650 Sensor protein GacS -0.19
    10 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.19
    11 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) -0.19
    12 PP_3849 putative calcium-binding protein, hemolysin-type -0.18
    13 PP_2687 conserved protein of unknown function -0.18
    14 PP_1582 conserved protein of unknown function -0.18
    15 PP_0083 tryptophan synthase beta chain -0.17
    16 PP_3175 putative Dioxygenase, ferredoxin reductase component -0.17
    17 PP_3857 conserved protein of unknown function -0.17
    18 PP_5361 47 kDa protein -0.17
    19 PP_2487 putative aldehyde dehydrogenase -0.17
    20 PP_0422 Indole-3-glycerol phosphate synthase -0.17

    Or look for positive cofitness