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  • Negative cofitness for PP_1482 from Pseudomonas putida KT2440

    polyamine ABC transporter, permease protein
    SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system permease protein

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1630 Regulatory protein RecX -0.16
    2 PP_3911 conserved protein of unknown function -0.15
    3 PP_3291 Metallo-beta-lactamase family protein -0.14
    4 PP_5370 Oxidoreductase-related protein -0.14
    5 PP_5624 conserved protein of unknown function -0.14
    6 PP_1789 Hydrolase, haloacid dehalogenase-like family -0.13
    7 PP_2926 UDP-glucose 6-dehydrogenase -0.13
    8 PP_1660 conserved protein of unknown function -0.13
    9 PP_3003 3-dehydroquinate dehydratase 3, type II -0.13
    10 PP_1357 conserved protein of unknown function -0.13
    11 PP_2639 4-hydroxy-tetrahydrodipicolinate synthase -0.13
    12 PP_2195 Putrescine-binding periplasmic protein -0.13
    13 PP_2906 Sensor histidine kinase -0.13
    14 PP_1246 conserved exported protein of unknown function -0.13
    15 PP_4906 conserved protein of unknown function -0.13
    16 PP_0043 cation efflux system protein -0.12
    17 PP_4495 aromatic amino acid transport protein -0.12
    18 PP_2408 cobalt-zinc-cadmium resistance protein -0.12
    19 PP_5242 Sensor histidine kinase/GAF domain protein -0.12
    20 PP_2054 putative DNA-binding transcriptional regulator -0.12

    Or look for positive cofitness