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  • Negative cofitness for PP_1477 from Pseudomonas putida KT2440

    ssDNA-specific exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3916 conserved protein of unknown function -0.21
    2 PP_5580 protein of unknown function -0.18
    3 PP_2359 putative Type 1 pili subunit CsuA/B protein -0.18
    4 PP_2732 conserved protein of unknown function -0.17
    5 PP_3529 dimethyl-sulfide monooxygenase -0.17
    6 PP_3128 putative Exopolysaccharide biosynthesis/transport protein -0.16
    7 PP_4904 Flagellar motor rotation protein -0.16
    8 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 -0.15
    9 PP_4261 cation-transporting P-type ATPase -0.15
    10 PP_0660 S-methyl-L-methionine transporter -0.15
    11 PP_2930 putative L-serine dehydratase -0.15
    12 PP_2769 putative Branched-chain amino acid ABC transporter, permease protein -0.15
    13 PP_1529 Probable cysteine desulfurase -0.15
    14 PP_4207 conserved protein of unknown function -0.14
    15 PP_2077 diaminopimelate decarboxylase -0.14
    16 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase -0.14
    17 PP_0994 putative RNA polymerase sigma factor -0.14
    18 PP_4583 putative Peptidase -0.14
    19 PP_1536 conserved protein of unknown function -0.14
    20 PP_2808 putative Oxidoreductase -0.14

    Or look for positive cofitness