• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_1440 from Pseudomonas putida KT2440

    tRNA (mo5U34)-methyltransferase
    SEED: tRNA (5-methoxyuridine) 34 synthase
    KEGG: tRNA (mo5U34)-methyltransferase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.30
    2 PP_3957 choline/carnitine/betaine transporter BetTC -0.29
    3 PP_2448 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) -0.28
    4 PP_4475 succinylglutamate desuccinylase -0.28
    5 PP_1795 conserved protein of unknown function -0.26
    6 PP_2645 magnesium transporter, ATP-dependent -0.25
    7 PP_2646 conserved protein of unknown function -0.25
    8 PP_2379 putative cytochrome oxidase biogenesis protein -0.23
    9 PP_5259 Transcriptional regulator, LysR family -0.23
    10 PP_5064 choline dehydrogenase -0.22
    11 PP_1320 stringent starvation protein A -0.22
    12 PP_4184 branched chain amino acid transporter -0.21
    13 PP_4939 conserved protein of unknown function -0.21
    14 PP_2643 aromatic acid chemoreceptor -0.21
    15 PP_4722 Transcription elongation factor GreA -0.20
    16 PP_1370 Glycosyl transferase, group 1 family protein -0.20
    17 PP_1793 Glycosyl transferase, group 2 family protein -0.20
    18 PP_2169 tRNA-dihydrouridine synthase A -0.20
    19 PP_4946 sodium/L-proline transporter -0.19
    20 PP_0496 Sodium/alanine symporter -0.19

    Or look for positive cofitness