Negative cofitness for PP_1428 from Pseudomonas putida KT2440

Sigma factor AlgU negative regulatory protein
SEED: Sigma factor RpoE negative regulatory protein RseA
KEGG: sigma-E factor negative regulatory protein RseA

Computing cofitness values with 989 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_1301		quality control serine endoprotease DegS	-0.30
2	PP_4232		Cytochrome c family protein	-0.25
3	PP_4924		Serine protease, subtilase family	-0.25
4	PP_3788		putative Non-ribosomal peptide synthetase	-0.24
5	PP_1072		Leucine-rich repeat domain protein	-0.24
6	PP_3790		diaminopimelate epimerase	-0.23
7	PP_4272		conserved membrane protein of unknown function	-0.23
8	PP_3787		conserved protein of unknown function	-0.22
9	PP_0506		putative ABC efflux transporter, permease protein	-0.21
10	PP_4319		conserved exported protein of unknown function	-0.21
11	PP_5076		L-glutamate synthase(NADPH) alpha subunit	-0.21
12	PP_4270		conserved exported protein of unknown function	-0.21
13	PP_0530		3,4-dihydroxy-2-butanone 4-phosphate synthase	-0.21
14	PP_5233		ammonium transporter AmtB	-0.20
15	PP_5075		glutamate synthase (NADPH) beta subunit	-0.20
16	PP_1792		Glycosyl transferase, group 2 family protein	-0.20
17	PP_5070		ParA family protein	-0.20
18	PP_3786		aminotransferase	-0.19
19	PP_4979		putative Periplasmic binding protein	-0.19
20	PP_5603		putative FAD dependent oxidoreductase	-0.19

Or look for positive cofitness