• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_1427 from Pseudomonas putida KT2440

    RNA polymerase sigma E factor
    SEED: RNA polymerase sigma-H factor AlgT
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1429 Sigma factor AlgU regulatory protein MucB -0.31
    2 PP_4148 putative inner membrane ABC transporter permease protein -0.30
    3 PP_1526 putative Beta-(1-3)-glucosyl transferase -0.27
    4 PP_4147 microcin C transporter - periplasmic binding protein -0.26
    5 PP_5025 Glucans biosynthesis glucosyltransferase H -0.26
    6 PP_5026 Glucans biosynthesis protein G -0.25
    7 PP_4149 putative inner membrane ABC transporter permease protein -0.25
    8 PP_1786 putative Glycosyl transferase -0.24
    9 PP_4755 Outer membrane ferrichrome-iron receptor -0.24
    10 PP_4150 microcin C transporter - ATP binding subunit -0.24
    11 PP_1034 multicopper oxidase -0.23
    12 PP_5028 proline iminopeptidase -0.23
    13 PP_2449 conserved protein of unknown function -0.22
    14 PP_1795 conserved protein of unknown function -0.22
    15 PP_4880 exoribonuclease R -0.22
    16 PP_1238 putative Lipoprotein -0.21
    17 PP_5311 putative signal transduction protein -0.21
    18 PP_4592 putative metal dependent hydrolase -0.21
    19 PP_0908 conserved exported protein of unknown function -0.21
    20 PP_1353 conserved membrane protein of unknown function -0.21

    Or look for positive cofitness