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  • Negative cofitness for PP_1393 from Pseudomonas putida KT2440

    putative transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1155 YaiC/YhcK/ArdA family protein -0.15
    2 PP_4939 conserved protein of unknown function -0.15
    3 PP_4412 conserved protein of unknown function -0.15
    4 PP_3680 conserved protein of unknown function -0.14
    5 PP_1415 putative membrane associated enzyme subunit -0.14
    6 PP_3069 Outer membrane autotransporter -0.14
    7 PP_1940 Methyl-accepting chemotaxis transducer -0.13
    8 PP_3422 Lytic transglycosylase -0.13
    9 PP_0165 GGDEF domain protein -0.13
    10 PP_2615 hemolysin-coregulated protein -0.13
    11 PP_3681 putative Helicase -0.13
    12 PP_0161 putative transmembrane sensor -0.12
    13 PP_3060 putative tail sheath protein -0.12
    14 PP_0168 putative surface adhesion protein -0.12
    15 PP_0210 putative Phycobiliprotein -0.12
    16 PP_4454 putative Opine ABC transporter, permease protein -0.12
    17 PP_4246 Periplasmic binding protein -0.12
    18 PP_5160 conserved exported protein of unknown function -0.12
    19 PP_1117 conserved protein of unknown function -0.12
    20 PP_2079 conserved protein of unknown function -0.12

    Or look for positive cofitness