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  • Negative cofitness for PP_1301 from Pseudomonas putida KT2440

    quality control serine endoprotease DegS
    SEED: Outer membrane stress sensor protease DegS
    KEGG: serine protease DegS

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4880 exoribonuclease R -0.38
    2 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) -0.33
    3 PP_0123 DNA polymerase I, 5 -0.32
    4 PP_4124 NADH-quinone oxidoreductase subunit G -0.31
    5 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.30
    6 PP_1429 Sigma factor AlgU regulatory protein MucB -0.30
    7 PP_1428 Sigma factor AlgU negative regulatory protein -0.30
    8 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver -0.30
    9 PP_5309 oxidative and nitrosative stress transcriptional dual regulator -0.30
    10 PP_5310 junction-specific ATP-dependent DNA helicase -0.29
    11 PP_4546 ATP-dependent helicase HrpA -0.29
    12 PP_0674 ADP/ATP ratio sensor and inhibitor of translation -0.29
    13 PP_5028 proline iminopeptidase -0.28
    14 PP_4942 conserved protein of unknown function -0.28
    15 PP_4131 NADH-quinone oxidoreductase subunit N -0.28
    16 PP_3415 Transcriptional regulator, LacI family -0.28
    17 PP_2472 putative transcriptional regulator, MerR family -0.28
    18 PP_2210 LysR family transcriptional regulator -0.27
    19 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L -0.27
    20 PP_2169 tRNA-dihydrouridine synthase A -0.27

    Or look for positive cofitness