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  • Negative cofitness for PP_1281 from Pseudomonas putida KT2440

    Alginate lyase
    SEED: Alginate lyase precursor (EC 4.2.2.3)
    KEGG: poly(beta-D-mannuronate) lyase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.34
    2 PP_1795 conserved protein of unknown function -0.32
    3 PP_3663 GGDEF domain protein -0.30
    4 PP_1370 Glycosyl transferase, group 1 family protein -0.29
    5 PP_4700 pantothenate synthetase -0.28
    6 PP_1363 conserved protein of unknown function -0.27
    7 PP_0190 putative disulfide bond formation protein B -0.26
    8 PP_5236 conserved protein of unknown function -0.25
    9 PP_3957 choline/carnitine/betaine transporter BetTC -0.25
    10 PP_1793 Glycosyl transferase, group 2 family protein -0.25
    11 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase -0.25
    12 PP_4939 conserved protein of unknown function -0.25
    13 PP_0439 conserved protein of unknown function -0.25
    14 PP_0247 Osmolarity sensor protein EnvZ -0.25
    15 PP_1545 conserved protein of unknown function -0.24
    16 PP_4978 conserved protein of unknown function -0.24
    17 PP_1364 conserved exported protein of unknown function -0.24
    18 PP_4475 succinylglutamate desuccinylase -0.23
    19 PP_2257 putative aerotaxis receptor -0.22
    20 PP_5064 choline dehydrogenase -0.22

    Or look for positive cofitness