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  • Negative cofitness for PP_1258 from Pseudomonas putida KT2440

    4-hydroxyproline epimerase
    SEED: 4-hydroxyproline epimerase (EC 5.1.1.8)
    KEGG: 4-hydroxyproline epimerase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5238 conserved protein of unknown function -0.13
    2 PP_1007 putative Transmembrane sensor -0.12
    3 PP_3154 lipid A 3-O-deacylase -0.12
    4 PP_2808 putative Oxidoreductase -0.11
    5 PP_0103 cytochrome c oxidase subunit 2 -0.09
    6 PP_1877 free methionine-(R)-sulfoxide reductase -0.09
    7 PP_4172 conserved exported protein of unknown function -0.09
    8 PP_5439 conserved protein of unknown function -0.09
    9 PP_0196 putative of ABC superfamily informational factor: ATP-binding components -0.08
    10 PP_5552 conserved protein of unknown function -0.08
    11 PP_1513 Ribosomal RNA small subunit methyltransferase J -0.08
    12 PP_0034 putative bactoprenol glycosyl-transferase from phage origin -0.08
    13 PP_3529 dimethyl-sulfide monooxygenase -0.08
    14 PP_1393 putative transcriptional regulator -0.08
    15 PP_3309 promiscuous aromatic aldehyde dehydrogenase, FAD-binding subunit -0.08
    16 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily -0.08
    17 PP_3846 (R)-stereoselective amidase -0.08
    18 PP_0839 tRNA Cm32/Um32 methyltransferase -0.08
    19 PP_2938 conserved protein of unknown function -0.08
    20 PP_2194 Transcriptional regulator, LysR family -0.08

    Or look for positive cofitness