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  • Negative cofitness for PP_1255 from Pseudomonas putida KT2440

    putative cis-4-hydroxy-D-proline oxidase
    SEED: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
    KEGG: D-amino-acid dehydrogenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2808 putative Oxidoreductase -0.11
    2 PP_1957 Oxidoreductase, Pdr/VanB family -0.11
    3 PP_3309 promiscuous aromatic aldehyde dehydrogenase, FAD-binding subunit -0.10
    4 PP_5465 conserved protein of unknown function -0.10
    5 PP_0546 sigma-54 dependent transcriptional regulator -0.10
    6 PP_5637 conserved protein of unknown function -0.10
    7 PP_4939 conserved protein of unknown function -0.10
    8 PP_2080 NAD-specific glutamate dehydrogenase -0.10
    9 PP_3846 (R)-stereoselective amidase -0.10
    10 PP_5061 Choline transporter -0.10
    11 PP_4684 conserved protein of unknown function with kinase-like domain -0.10
    12 PP_4450 Phosphoglycerate mutase family protein -0.09
    13 PP_2257 putative aerotaxis receptor -0.09
    14 PP_3649 Transcriptional regulator, GntR family -0.09
    15 PP_5547 protein of unknown function -0.09
    16 PP_3776 putative permease (RarD protein) -0.09
    17 PP_5177 spermidine/putrescine ABC transporter - permease subunit -0.09
    18 PP_4118 putative Membrane protein -0.09
    19 PP_2861 Methyl-accepting chemotaxis transducer -0.09
    20 PP_1374 conserved protein of unknown function -0.09

    Or look for positive cofitness