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  • Negative cofitness for PP_1236 from Pseudomonas putida KT2440

    putative Glycine cleavage system transcriptional repressor
    SEED: Glycine cleavage system transcriptional antiactivator GcvR
    KEGG: glycine cleavage system transcriptional repressor

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5311 putative signal transduction protein -0.28
    2 PP_0995 conserved membrane protein of unknown function -0.28
    3 PP_3555 putative Transmembrane sensor -0.25
    4 PP_0413 Polyamine ABC transporter, permease protein -0.25
    5 PP_3663 GGDEF domain protein -0.24
    6 PP_2790 Sigma-54 dependent sensory box protein -0.23
    7 PP_0242 Transcriptional regulator, TetR family -0.23
    8 PP_0185 Positive alginate biosynthesis regulatory protein -0.23
    9 PP_5294 Ribonuclease PH -0.22
    10 PP_5236 conserved protein of unknown function -0.22
    11 PP_4946 sodium/L-proline transporter -0.21
    12 PP_3925 conserved protein of unknown function -0.21
    13 PP_1370 Glycosyl transferase, group 1 family protein -0.21
    14 PP_0439 conserved protein of unknown function -0.21
    15 PP_1224 periplasmic subunit of the TolQRA transport system -0.20
    16 PP_2326 Universal stress protein -0.20
    17 PP_4722 Transcription elongation factor GreA -0.20
    18 PP_1860 Organic hydroperoxide resistance transcriptional regulator -0.20
    19 PP_1190 conserved protein of unknown function -0.19
    20 PP_2645 magnesium transporter, ATP-dependent -0.19

    Or look for positive cofitness