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  • Negative cofitness for PP_1215 from Pseudomonas putida KT2440

    Crossover junction endodeoxyribonuclease RuvC
    SEED: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
    KEGG: crossover junction endodeoxyribonuclease RuvC

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0570 lipoprotein of unknown function -0.25
    2 PP_0506 putative ABC efflux transporter, permease protein -0.24
    3 PP_1792 Glycosyl transferase, group 2 family protein -0.23
    4 PP_0033 putative undecaprenyl-glycosyl transferase -0.22
    5 PP_5639 conserved exported protein of unknown function -0.22
    6 PP_4450 Phosphoglycerate mutase family protein -0.21
    7 PP_3376 putative phosphonate dehydrogenase -0.21
    8 PP_4311 putative D-amino acid dehydrogenase 2 small subunit -0.21
    9 PP_0091 putative lipoprotein -0.21
    10 PP_5370 Oxidoreductase-related protein -0.21
    11 PP_1072 Leucine-rich repeat domain protein -0.20
    12 PP_0675 glutamate dehydrogenase, NADP-dependent -0.20
    13 PP_4246 Periplasmic binding protein -0.20
    14 PP_4658 putative methyl-accepting chemotaxis protein -0.20
    15 PP_5060 conserved protein of unknown function -0.20
    16 PP_0327 formyltetrahydrofolate deformylase -0.20
    17 PP_2276 putative phage exonuclease -0.20
    18 PP_2714 Sensor histidine kinase -0.20
    19 PP_0049 conserved protein of unknown function -0.20
    20 PP_5037 lipocalin family lipoprotein -0.20

    Or look for positive cofitness