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  • Negative cofitness for PP_1145 from Pseudomonas putida KT2440

    RNA polymerase-associated protein RapA
    SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
    KEGG: ATP-dependent helicase HepA

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0246 two-component system DNA-binding response transcriptional dual regulator -0.23
    2 PP_1014 aldose-ketose isomerase -0.22
    3 PP_4978 conserved protein of unknown function -0.21
    4 PP_4957 conserved protein of unknown function -0.21
    5 PP_4982 putative cytochrome b561, iron-regulated -0.21
    6 PP_1234 putative permease -0.20
    7 PP_2356 putative Phytochrome family protein -0.20
    8 PP_4838 Outer membrane copper receptor OprC -0.19
    9 PP_4607 putative Transmembrane sensor -0.19
    10 PP_4514 putative esterase of the alpha-beta hydrolase superfamily -0.19
    11 PP_0351 putative Transmembrane sensor protein -0.19
    12 PP_5603 putative FAD dependent oxidoreductase -0.19
    13 PP_1391 Transcriptional regulator, LysR family -0.19
    14 PP_3420 Sensor histidine kinase -0.18
    15 PP_4272 conserved membrane protein of unknown function -0.18
    16 PP_4540 Hydrolase, alpha/beta fold family -0.18
    17 PP_5605 conserved exported protein of unknown function -0.18
    18 PP_2354 Sensory box histidine kinase/response regulator -0.18
    19 PP_1893 medium-long chain acyl-CoA dehydrogenase -0.18
    20 PP_0227 periplasmic cystine-binding protein -0.18

    Or look for positive cofitness