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  • Negative cofitness for PP_1109 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3831 conserved protein of unknown function -0.37
    2 PP_1783 dTDP-glucose pyrophosphorylase -0.35
    3 PP_2933 GSH-dependent disulfide bond oxidoreductase -0.33
    4 PP_5310 junction-specific ATP-dependent DNA helicase -0.31
    5 PP_t11 tRNA-Lys -0.30
    6 PP_0994 putative RNA polymerase sigma factor -0.30
    7 PP_1733 membrane ATPase of the MinC-MinD-MinE system -0.30
    8 PP_0872 Peptide chain release factor 3 -0.29
    9 PP_1734 Probable septum site-determining protein MinC -0.29
    10 PP_2210 LysR family transcriptional regulator -0.29
    11 PP_2336 aconitate hydratase 1 -0.28
    12 PP_4824 Sensor histidine kinase/response regulator -0.27
    13 PP_4804 RlpA-like lipoprotein -0.27
    14 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.27
    15 PP_2927 conserved protein of unknown function -0.27
    16 PP_4542 putative ABC transporter, ATP-binding protein/permease protein -0.27
    17 PP_4902 Oligoribonuclease -0.26
    18 PP_3775 putative sarcosine oxidase -0.26
    19 PP_3624 conserved exported protein of unknown function -0.26
    20 PP_0385 putative serine acetyltransferase -0.26

    Or look for positive cofitness