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  • Negative cofitness for PP_1099 from Pseudomonas putida KT2440

    Cold shock protein CapB
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.39
    2 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.37
    3 PP_1627 conserved protein of unknown function -0.37
    4 PP_1797 HlyD family secretion protein -0.36
    5 PP_3627 conserved protein of unknown function -0.36
    6 PP_0540 conserved inner membrane protein -0.35
    7 PP_2148 transcription-repair coupling factor -0.31
    8 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.31
    9 PP_1774 conserved exported protein of unknown function -0.31
    10 PP_1523 conserved protein of unknown function -0.30
    11 PP_1803 UDP-sugar epimerase -0.30
    12 PP_1871 Protease HtpX -0.30
    13 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.30
    14 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.29
    15 PP_5283 periplasmic dipeptide transport protein -0.28
    16 PP_1204 putative Lipoprotein -0.28
    17 PP_4798 putative Membrane-bound lytic murein transglycosylase -0.28
    18 PP_5284 UPF0758 protein PP_5284 -0.28
    19 PP_1918 septation protein -0.27
    20 PP_1075 glycerol kinase -0.27

    Or look for positive cofitness