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  • Negative cofitness for PP_1059 from Pseudomonas putida KT2440

    Uncharacterized amino acid permease YtnA
    SEED: D-serine/D-alanine/glycine transporter
    KEGG: amino acid transporter, AAT family

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2245 Transcriptional regulator, Cro/CI family -0.35
    2 PP_3654 leucine-responsive regulatory protein -0.33
    3 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase -0.33
    4 PP_3653 Transporter, LysE family -0.32
    5 PP_1505 Phosphoenolpyruvate carboxylase -0.28
    6 PP_0980 Probable cytosol aminopeptidase -0.27
    7 PP_4404 dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex -0.27
    8 PP_1872 glutamate-pyruvate aminotransferase -0.26
    9 PP_1313 Transcriptional regulator, AraC family -0.25
    10 PP_1016 mannose/glucose ABC transporter, permease protein -0.24
    11 PP_4615 conserved membrane protein of unknown function -0.24
    12 PP_1013 Sensor histidine kinase -0.24
    13 PP_1697 transcriptional regulator, GntR family -0.24
    14 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.23
    15 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein -0.23
    16 PP_1014 aldose-ketose isomerase -0.23
    17 PP_0680 ATP-dependent protease-like protein -0.23
    18 PP_5183 glutamylpolyamine synthetase -0.23
    19 PP_4653 adenine:H+ symporter -0.23
    20 PP_3417 D-gluconate transporter -0.22

    Or look for positive cofitness