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  • Negative cofitness for PP_1017 from Pseudomonas putida KT2440

    mannose/glucose ABC transporter, permease protein
    SEED: Glucose ABC transport system, inner membrane component 2
    KEGG: multiple sugar transport system permease protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3415 Transcriptional regulator, LacI family -0.41
    2 PP_1445 carbohydrate-selective porin -0.32
    3 PP_1021 DNA-binding transcriptional regulator -0.25
    4 PP_4373 Transcriptional regulator FleQ -0.24
    5 PP_2683 putative sensory box histidine kinase/response regulator -0.23
    6 PP_2665 Glycerol metabolism activator -0.21
    7 PP_2556 Chromate transporter -0.21
    8 PP_2682 Fe-containing alcohol dehydrogenase -0.21
    9 PP_2666 conserved exported protein of unknown function -0.21
    10 PP_5166 Sigma-54 dependent transcriptional regulator -0.20
    11 PP_1504 conserved protein of unknown function -0.20
    12 PP_1059 Uncharacterized amino acid permease YtnA -0.20
    13 PP_3957 choline/carnitine/betaine transporter BetTC -0.19
    14 PP_2210 LysR family transcriptional regulator -0.19
    15 PP_4769 conserved protein of unknown function -0.19
    16 PP_2363 conserved protein of unknown function -0.19
    17 PP_0633 Type 4 fimbrial assembly protein PilC -0.19
    18 PP_0969 Transcriptional regulator, GntR family -0.19
    19 PP_3304 Multidrug resistance transporter, Bcr/CflA family -0.18
    20 PP_3777 conserved protein of unknown function -0.18

    Or look for positive cofitness