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  • Negative cofitness for PP_1012 from Pseudomonas putida KT2440

    DNA-binding response regulator
    SEED: DNA-binding response regulator GltR, controls specific porins for the entry of glucose

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3415 Transcriptional regulator, LacI family -0.39
    2 PP_1445 carbohydrate-selective porin -0.30
    3 PP_2665 Glycerol metabolism activator -0.25
    4 PP_2682 Fe-containing alcohol dehydrogenase -0.24
    5 PP_1021 DNA-binding transcriptional regulator -0.24
    6 PP_2666 conserved exported protein of unknown function -0.24
    7 PP_2683 putative sensory box histidine kinase/response regulator -0.24
    8 PP_4373 Transcriptional regulator FleQ -0.22
    9 PP_5166 Sigma-54 dependent transcriptional regulator -0.22
    10 PP_3751 putative Cyanate transporter -0.21
    11 PP_1059 Uncharacterized amino acid permease YtnA -0.21
    12 PP_2210 LysR family transcriptional regulator -0.19
    13 PP_1806 putative arabinose 5-phosphate isomerase -0.19
    14 PP_2363 conserved protein of unknown function -0.19
    15 PP_3957 choline/carnitine/betaine transporter BetTC -0.19
    16 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease -0.19
    17 PP_2543 gamma-aminobutyrate permease -0.18
    18 PP_5117 putative hydrolase -0.18
    19 PP_1824 Smr domain protein -0.18
    20 PP_3719 Putrescine-binding periplasmic protein -0.18

    Or look for positive cofitness