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  • Negative cofitness for PP_0994 from Pseudomonas putida KT2440

    putative RNA polymerase sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.37
    2 PP_0506 putative ABC efflux transporter, permease protein -0.33
    3 PP_3790 diaminopimelate epimerase -0.33
    4 PP_1109 Transcriptional regulator, GntR family -0.30
    5 PP_1111 putative Synthetase -0.29
    6 PP_1110 serine acetyltransferase -0.29
    7 PP_3788 putative Non-ribosomal peptide synthetase -0.29
    8 PP_2714 Sensor histidine kinase -0.29
    9 PP_3376 putative phosphonate dehydrogenase -0.28
    10 PP_3244 Magnesium transporter, MgtC family -0.27
    11 PP_2996 conserved protein of unknown function -0.26
    12 PP_3786 aminotransferase -0.26
    13 PP_4421 putative aminotransferase -0.26
    14 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.23
    15 PP_0662 putative Threonine synthase -0.23
    16 PP_3371 Sensor histidine kinase -0.23
    17 PP_3787 conserved protein of unknown function -0.22
    18 PP_0507 putative ABC efflux transporter, ATP-binding protein -0.22
    19 PP_4922 Phosphomethylpyrimidine synthase -0.22
    20 PP_5200 proline aminopeptidase P II -0.22

    Or look for positive cofitness