Negative cofitness for PP_0990 from Pseudomonas putida KT2440

DoxX family protein
SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

Computing cofitness values with 989 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	-0.35
2	PP_4171		conserved exported protein of unknown function	-0.31
3	PP_1650		Sensor protein GacS	-0.29
4	PP_4099		two-componenent system BarA/UvrY - regulatory subunit	-0.29
5	PP_1626		DNA mismatch repair protein MutS	-0.27
6	PP_1656		ATP:GTP 3'-pyrophosphotransferase	-0.27
7	PP_1798		Outer membrane efflux protein	-0.25
8	PP_1774		conserved exported protein of unknown function	-0.25
9	PP_4100		Transcriptional regulator, Cro/CI family	-0.25
10	PP_1803		UDP-sugar epimerase	-0.25
11	PP_0540		conserved inner membrane protein	-0.25
12	PP_1627		conserved protein of unknown function	-0.24
13	PP_0066		Ribosomal RNA small subunit methyltransferase B	-0.24
14	PP_t49		tRNA-Met	-0.24
15	PP_0794		1-phosphofructokinase monomer	-0.24
16	PP_3627		conserved protein of unknown function	-0.23
17	PP_1770		3-phosphoshikimate 1-carboxyvinyltransferase	-0.23
18	PP_2231		putative permease of the drug/metabolite transporter (DMT) superfamily	-0.23
19	PP_4132		conserved protein of unknown function	-0.22
20	PP_1871		Protease HtpX	-0.22

Or look for positive cofitness