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  • Negative cofitness for PP_0972 from Pseudomonas putida KT2440

    UPF0213 protein PP_0972
    SEED: FIG00955494: hypothetical protein
    KEGG: putative endonuclease

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1650 Sensor protein GacS -0.19
    2 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.19
    3 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.16
    4 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.16
    5 PP_5467 conserved exported protein of unknown function -0.16
    6 PP_t49 tRNA-Met -0.15
    7 PP_1803 UDP-sugar epimerase -0.15
    8 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.15
    9 PP_1626 DNA mismatch repair protein MutS -0.14
    10 PP_4176 putative 5-oxo-L-prolinase -0.14
    11 PP_0794 1-phosphofructokinase monomer -0.14
    12 PP_1777 phosphomannomutase -0.14
    13 PP_0541 Acetyltransferase, GNAT family -0.13
    14 PP_4171 conserved exported protein of unknown function -0.13
    15 PP_1798 Outer membrane efflux protein -0.13
    16 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.13
    17 PP_0091 putative lipoprotein -0.13
    18 PP_2357 putative Type 1 pili protein CsuB -0.13
    19 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.13
    20 PP_5270 D-amino-acid:quinone oxidoreductase (deaminating) -0.12

    Or look for positive cofitness