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  • Negative cofitness for PP_0887 from Pseudomonas putida KT2440

    Sensor histidine kinase
    SEED: Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
    KEGG: two-component system, sensor histidine kinase RegB

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.30
    2 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.29
    3 PP_1627 conserved protein of unknown function -0.28
    4 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.28
    5 PP_2032 putative ATPase -0.28
    6 PP_t49 tRNA-Met -0.27
    7 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.27
    8 PP_1626 DNA mismatch repair protein MutS -0.26
    9 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase -0.25
    10 PP_5639 conserved exported protein of unknown function -0.25
    11 PP_1803 UDP-sugar epimerase -0.24
    12 PP_0540 conserved inner membrane protein -0.24
    13 PP_3627 conserved protein of unknown function -0.24
    14 PP_4515 Transcriptional regulator, MarR family -0.24
    15 PP_5222 adenylate cyclase -0.24
    16 PP_4198 OmpA family protein -0.24
    17 PP_1797 HlyD family secretion protein -0.24
    18 PP_0570 lipoprotein of unknown function -0.24
    19 PP_3769 conserved exported protein of unknown function -0.23
    20 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.23

    Or look for positive cofitness