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  • Negative cofitness for PP_0865 from Pseudomonas putida KT2440

    ECF subfamily RNA polymerase sigma-24 factor
    SEED: FIG006045: Sigma factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1224 periplasmic subunit of the TolQRA transport system -0.18
    2 PP_4940 Putative glycosyltransferase -0.16
    3 PP_5457 conserved protein of unknown function -0.15
    4 PP_1020 putative glucose-6-phosphate 1-epimerase -0.15
    5 PP_4939 conserved protein of unknown function -0.14
    6 PP_4723 Carbamoyl-phosphate synthase large chain -0.13
    7 PP_0339 Pyruvate dehydrogenase E1 component -0.13
    8 PP_4029 NADH pyrophosphatase -0.13
    9 PP_4724 Carbamoyl-phosphate synthase small chain -0.13
    10 PP_0753 putative Lipoprotein -0.13
    11 PP_4162 conserved membrane protein of unknown function -0.13
    12 PP_4803 D-alanyl-D-alanine carboxypeptidase -0.13
    13 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit -0.12
    14 PP_3243 Acetyltransferase, GNAT family -0.12
    15 PP_5742 putative membrane protein of unknown function -0.12
    16 PP_4683 transglycosylase/transpeptidase -0.12
    17 PP_0143 conserved membrane protein of unknown function -0.12
    18 PP_4999 dihydroorotase-like protein -0.12
    19 PP_4044 conserved protein of unknown function -0.11
    20 PP_1579 conserved protein of unknown function -0.11

    Or look for positive cofitness