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  • Negative cofitness for PP_0859 from Pseudomonas putida KT2440

    putative ketoglutaramate omega-amidase
    SEED: Aliphatic amidase AmiE (EC 3.5.1.4)
    KEGG: carbon-nitrogen hydrolase family protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1262 LysR family transcriptional regulator -0.26
    2 PP_3415 Transcriptional regulator, LacI family -0.26
    3 PP_4131 NADH-quinone oxidoreductase subunit N -0.24
    4 PP_5327 putative phosphate ABC transporter, permease subunit -0.23
    5 PP_4124 NADH-quinone oxidoreductase subunit G -0.22
    6 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M -0.21
    7 PP_4120 NADH-quinone oxidoreductase subunit B -0.21
    8 PP_1021 DNA-binding transcriptional regulator -0.21
    9 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.20
    10 PP_0397 protein kinase -0.20
    11 PP_0396 conserved protein of unknown function -0.20
    12 PP_0395 putative type IV piliation protein -0.20
    13 PP_5041 glycogen phosphorylase -0.20
    14 PP_3755 3-hydroxybutyryl-CoA dehydrogenase -0.20
    15 PP_5502 ribosome modulation factor -0.20
    16 PP_3484 Response regulator receiver protein -0.20
    17 PP_4483 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit -0.19
    18 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) -0.19
    19 PP_3719 Putrescine-binding periplasmic protein -0.19
    20 PP_0760 conserved membrane protein of unknown function -0.19

    Or look for positive cofitness