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  • Negative cofitness for PP_0832 from Pseudomonas putida KT2440

    S-adenosylmethionine:tRNA ribosyltransferase-isomerase
    SEED: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
    KEGG: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.41
    2 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.40
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.38
    4 PP_1627 conserved protein of unknown function -0.37
    5 PP_3627 conserved protein of unknown function -0.34
    6 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.33
    7 PP_1797 HlyD family secretion protein -0.33
    8 PP_1774 conserved exported protein of unknown function -0.33
    9 PP_5284 UPF0758 protein PP_5284 -0.31
    10 PP_0540 conserved inner membrane protein -0.31
    11 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.31
    12 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.30
    13 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.30
    14 PP_4781 Sensor histidine kinase -0.29
    15 PP_1918 septation protein -0.29
    16 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.29
    17 PP_4495 aromatic amino acid transport protein -0.29
    18 PP_t49 tRNA-Met -0.28
    19 PP_1871 Protease HtpX -0.28
    20 PP_1523 conserved protein of unknown function -0.28

    Or look for positive cofitness