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  • Negative cofitness for PP_0789 from Pseudomonas putida KT2440

    N-acetyl-anhydromuramyl-L-alanine-amidase
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
    KEGG: AmpD protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1795 conserved protein of unknown function -0.65
    2 PP_1786 putative Glycosyl transferase -0.64
    3 PP_1793 Glycosyl transferase, group 2 family protein -0.54
    4 PP_1370 Glycosyl transferase, group 1 family protein -0.52
    5 PP_4939 conserved protein of unknown function -0.49
    6 PP_1320 stringent starvation protein A -0.47
    7 PP_3957 choline/carnitine/betaine transporter BetTC -0.46
    8 PP_0190 putative disulfide bond formation protein B -0.43
    9 PP_2448 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) -0.42
    10 PP_4978 conserved protein of unknown function -0.41
    11 PP_5064 choline dehydrogenase -0.41
    12 PP_0624 Uncharacterized protein YfiH -0.41
    13 PP_0439 conserved protein of unknown function -0.41
    14 PP_4859 Transcriptional regulator, TetR family -0.40
    15 PP_2852 putative Sulfatase domain protein -0.40
    16 PP_4710 tRNA pseudouridine 55 synthase -0.40
    17 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase -0.40
    18 PP_4722 Transcription elongation factor GreA -0.39
    19 PP_0247 Osmolarity sensor protein EnvZ -0.38
    20 PP_1190 conserved protein of unknown function -0.38

    Or look for positive cofitness