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  • Negative cofitness for PP_0607 from Pseudomonas putida KT2440

    putative Type IV pili biogenesis protein FimT
    SEED: Type IV fimbrial biogenesis protein FimT
    KEGG: type IV fimbrial biogenesis protein FimT

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2870 putative spermidine/putrescine-binding periplasmic protein -0.19
    2 PP_4492 carbohydrate efflux transporter -0.18
    3 PP_2316 putative ABC transporter, permease protein -0.18
    4 PP_0537 putative transcriptional regulator -0.17
    5 PP_3531 conserved exported protein of unknown function -0.17
    6 PP_4724 Carbamoyl-phosphate synthase small chain -0.17
    7 PP_4004 DNA translocase FtsK -0.17
    8 PP_4999 dihydroorotase-like protein -0.17
    9 PP_0641 conserved protein of unknown function -0.17
    10 PP_0348 conserved protein of unknown function -0.16
    11 PP_3943 N-formylmaleamate deformylase -0.16
    12 PP_3969 Response regulator -0.16
    13 PP_4839 putative iron-regulated membrane protein -0.16
    14 PP_4799 putative Muramoyltetrapeptide carboxypeptidase -0.15
    15 PP_2091 putative Serine/threonine-protein kinase -0.15
    16 PP_0833 queuine tRNA-ribosyltransferase -0.15
    17 PP_3684 conserved protein of unknown function -0.15
    18 PP_1894 glutathione S-transferase reducing arsenate to arsenite -0.15
    19 PP_0339 Pyruvate dehydrogenase E1 component -0.15
    20 PP_2500 conserved protein of unknown function -0.15

    Or look for positive cofitness