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  • Negative cofitness for PP_0530 from Pseudomonas putida KT2440

    3,4-dihydroxy-2-butanone 4-phosphate synthase
    SEED: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)
    KEGG: 3,4-dihydroxy 2-butanone 4-phosphate synthase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1428 Sigma factor AlgU negative regulatory protein -0.22
    2 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase -0.19
    3 PP_5338 aspartate ammonia-lyase -0.19
    4 PP_0498 conserved protein of unknown function -0.18
    5 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.18
    6 PP_4590 conserved protein of unknown function -0.18
    7 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase -0.18
    8 PP_3649 Transcriptional regulator, GntR family -0.18
    9 PP_1786 putative Glycosyl transferase -0.17
    10 PP_0840 serine acetyltransferase -0.17
    11 PP_0123 DNA polymerase I, 5 -0.17
    12 PP_4475 succinylglutamate desuccinylase -0.16
    13 PP_4939 conserved protein of unknown function -0.16
    14 PP_1962 Site-specific recombinase, phage integrase family -0.16
    15 PP_1529 Probable cysteine desulfurase -0.16
    16 PP_4120 NADH-quinone oxidoreductase subunit B -0.16
    17 PP_4722 Transcription elongation factor GreA -0.16
    18 PP_4131 NADH-quinone oxidoreductase subunit N -0.16
    19 PP_4124 NADH-quinone oxidoreductase subunit G -0.16
    20 PP_1226 pre-queuosine 0 synthase -0.16

    Or look for positive cofitness