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  • Negative cofitness for PP_0506 from Pseudomonas putida KT2440

    putative ABC efflux transporter, permease protein
    SEED: ABC-type antimicrobial peptide transport system, permease component

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3831 conserved protein of unknown function -0.41
    2 PP_2025 Exonuclease SbcD -0.40
    3 PP_2210 LysR family transcriptional regulator -0.38
    4 PP_1824 Smr domain protein -0.37
    5 PP_4100 Transcriptional regulator, Cro/CI family -0.37
    6 PP_2832 galactose-binding protein regulator -0.36
    7 PP_1783 dTDP-glucose pyrophosphorylase -0.36
    8 PP_1629 Protein RecA -0.36
    9 PP_4542 putative ABC transporter, ATP-binding protein/permease protein -0.35
    10 PP_4895 tRNA dimethylallyltransferase -0.35
    11 PP_4964 D-erythrose 4-phosphate dehydrogenase -0.35
    12 PP_0994 putative RNA polymerase sigma factor -0.33
    13 PP_4171 conserved exported protein of unknown function -0.33
    14 PP_3770 conserved protein of unknown function -0.33
    15 PP_t11 tRNA-Lys -0.32
    16 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.32
    17 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.32
    18 PP_5310 junction-specific ATP-dependent DNA helicase -0.32
    19 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex -0.31
    20 PP_2933 GSH-dependent disulfide bond oxidoreductase -0.31

    Or look for positive cofitness