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  • Negative cofitness for PP_0496 from Pseudomonas putida KT2440

    Sodium/alanine symporter
    SEED: Probable AGCS sodium/alanine/glycine symporter
    KEGG: alanine or glycine:cation symporter, AGCS family

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.53
    2 PP_1798 Outer membrane efflux protein -0.43
    3 PP_t49 tRNA-Met -0.42
    4 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.42
    5 PP_1627 conserved protein of unknown function -0.41
    6 PP_1626 DNA mismatch repair protein MutS -0.40
    7 PP_3627 conserved protein of unknown function -0.40
    8 PP_0540 conserved inner membrane protein -0.37
    9 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.37
    10 PP_1803 UDP-sugar epimerase -0.37
    11 PP_4171 conserved exported protein of unknown function -0.36
    12 PP_1871 Protease HtpX -0.36
    13 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.35
    14 PP_0405 conserved protein of unknown function -0.35
    15 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase -0.35
    16 PP_1774 conserved exported protein of unknown function -0.35
    17 PP_1800 Oxidoreductase Rmd -0.35
    18 PP_4515 Transcriptional regulator, MarR family -0.34
    19 PP_4495 aromatic amino acid transport protein -0.34
    20 PP_1650 Sensor protein GacS -0.34

    Or look for positive cofitness