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  • Negative cofitness for PP_0486 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2351 propionyl-CoA synthetase -0.20
    2 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.20
    3 PP_4171 conserved exported protein of unknown function -0.20
    4 PP_4198 OmpA family protein -0.19
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.18
    6 PP_1627 conserved protein of unknown function -0.18
    7 PP_1797 HlyD family secretion protein -0.18
    8 PP_1798 Outer membrane efflux protein -0.18
    9 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.17
    10 PP_0876 Transcriptional regulator, AraC family -0.17
    11 PP_0564 conserved protein of unknown function -0.17
    12 PP_1774 conserved exported protein of unknown function -0.17
    13 PP_4498 Segregation and condensation protein A -0.17
    14 PP_3287 transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family -0.16
    15 PP_4173 Sensor histidine kinase/response regulator -0.16
    16 PP_4495 aromatic amino acid transport protein -0.16
    17 PP_3768 putative shikimate 5-dehydrogenase -0.15
    18 PP_2177 putative transcriptional regulator -0.15
    19 PP_1064 Hydrolase, alpha/beta fold family -0.15
    20 PP_1781 putative O-acyltransferase -0.15

    Or look for positive cofitness