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  • Negative cofitness for PP_0401 from Pseudomonas putida KT2440

    Ribosomal RNA small subunit methyltransferase A
    SEED: SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)
    KEGG: 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5203 5-formyltetrahydrofolate cyclo-ligase -0.27
    2 PP_4979 putative Periplasmic binding protein -0.21
    3 PP_4977 5,10-methylenetetrahydrofolate reductase -0.21
    4 PP_1793 Glycosyl transferase, group 2 family protein -0.21
    5 PP_2436 Transcriptional regulator, LysR family -0.21
    6 PP_1792 Glycosyl transferase, group 2 family protein -0.20
    7 PP_2375 cobalamin-dependent methionine synthase -0.20
    8 PP_0362 Biotin synthase -0.20
    9 PP_1079 Ornithine carbamoyltransferase -0.19
    10 PP_0337 Sensory box protein -0.19
    11 PP_2168 Transaldolase -0.19
    12 PP_1303 Sulfate adenylyltransferase subunit 2 -0.19
    13 PP_3731 Transcriptional regulator, TetR family -0.19
    14 PP_1795 conserved protein of unknown function -0.18
    15 PP_4939 conserved protein of unknown function -0.18
    16 PP_2326 Universal stress protein -0.18
    17 PP_0570 lipoprotein of unknown function -0.17
    18 PP_4948 Acyl-CoA dehydrogenase family protein -0.17
    19 PP_4152 conserved protein of unknown function -0.17
    20 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit -0.17

    Or look for positive cofitness