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  • Negative cofitness for PP_0380 from Pseudomonas putida KT2440

    Coenzyme PQQ synthesis protein A
    SEED: Coenzyme PQQ synthesis protein A
    KEGG: pyrroloquinoline quinone biosynthesis protein A

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1445 carbohydrate-selective porin -0.31
    2 PP_1021 DNA-binding transcriptional regulator -0.27
    3 PP_3415 Transcriptional regulator, LacI family -0.25
    4 PP_0137 glutamate/aspartate-proton DAACS transporter -0.24
    5 PP_1067 Sensor histidine kinase -0.23
    6 PP_3663 GGDEF domain protein -0.20
    7 PP_5337 LysR family transcriptional regulator -0.19
    8 PP_1418 putative Tricarboxylate transport protein TctC -0.18
    9 PP_1419 tricarboxylate-specific outer membrane porin -0.18
    10 PP_2639 4-hydroxy-tetrahydrodipicolinate synthase -0.17
    11 PP_0978 conserved protein of unknown function -0.17
    12 PP_2642 Transcriptional regulator, GntR family -0.17
    13 PP_0279 conserved protein of unknown function -0.17
    14 PP_0506 putative ABC efflux transporter, permease protein -0.17
    15 PP_1420 Transcriptional regulatory protein tctD -0.16
    16 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein -0.16
    17 PP_1421 putative Sensor histidine kinase TctE -0.16
    18 PP_1364 conserved exported protein of unknown function -0.16
    19 PP_4941 conserved exported protein of unknown function -0.16
    20 PP_1145 RNA polymerase-associated protein RapA -0.15

    Or look for positive cofitness