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  • Negative cofitness for PP_0358 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Protein rarD
    KEGG: chloramphenicol-sensitive protein RarD

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1111 putative Synthetase -0.19
    2 PP_1109 Transcriptional regulator, GntR family -0.19
    3 PP_1110 serine acetyltransferase -0.18
    4 PP_2390 Transcriptional regulator, LysR family -0.18
    5 PP_1139 branched chain amino acid transporter - permease subunit -0.17
    6 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.17
    7 PP_2388 Transporter, LysE family -0.17
    8 PP_5408 conserved protein of unknown function -0.16
    9 PP_5733 putative metal-binding protein -0.16
    10 PP_3376 putative phosphonate dehydrogenase -0.16
    11 PP_0042 conserved exported protein of unknown function -0.16
    12 PP_0290 Imidazole glycerol phosphate synthase subunit HisH -0.16
    13 PP_1791 putative Aldolase/synthase -0.16
    14 PP_3790 diaminopimelate epimerase -0.16
    15 PP_5387 probable copper efflux transporter, CzcA family -0.15
    16 PP_3680 conserved protein of unknown function -0.15
    17 PP_4924 Serine protease, subtilase family -0.15
    18 PP_1626 DNA mismatch repair protein MutS -0.15
    19 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB -0.15
    20 PP_4078 conserved protein of unknown function -0.15

    Or look for positive cofitness