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  • Negative cofitness for PP_0353 from Pseudomonas putida KT2440

    Exonuclease
    SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
    KEGG: DNA polymerase III subunit epsilon

    Computing cofitness values with 995 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0154 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) -0.32
    2 PP_1695 putative Sodium-solute symporter/sensory box histidine kinase/response regulator -0.29
    3 PP_1696 putative Membrane protein -0.29
    4 PP_3755 3-hydroxybutyryl-CoA dehydrogenase -0.27
    5 PP_3753 Transcriptional regulator, AraC family -0.24
    6 PP_3415 Transcriptional regulator, LacI family -0.22
    7 PP_3754 Beta-ketothiolase BktB -0.22
    8 PP_1635 DNA-binding response regulator -0.22
    9 PP_1445 carbohydrate-selective porin -0.21
    10 PP_2790 Sigma-54 dependent sensory box protein -0.21
    11 PP_4941 conserved exported protein of unknown function -0.20
    12 PP_2791 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) -0.20
    13 PP_5502 ribosome modulation factor -0.19
    14 PP_3300 Transcriptional regulator, tetR family -0.19
    15 PP_0345 putative Heptose kinase WapP -0.19
    16 PP_3834 conserved protein of unknown function -0.19
    17 PP_3833 Response regulator -0.19
    18 PP_0909 conserved exported protein of unknown function -0.18
    19 PP_0913 conserved exported protein of unknown function -0.18
    20 PP_0910 conserved exported protein of unknown function -0.18

    Or look for positive cofitness