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  • Negative cofitness for PP_0327 from Pseudomonas putida KT2440

    formyltetrahydrofolate deformylase
    SEED: Formyltetrahydrofolate deformylase (EC 3.5.1.10)
    KEGG: formyltetrahydrofolate deformylase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0123 DNA polymerase I, 5 -0.22
    2 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB -0.21
    3 PP_5310 junction-specific ATP-dependent DNA helicase -0.21
    4 PP_0490 formate dehydrogenase-O, beta subunit -0.21
    5 PP_5338 aspartate ammonia-lyase -0.21
    6 PP_4880 exoribonuclease R -0.20
    7 PP_4943 putative Glycosyl transferase -0.20
    8 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein -0.20
    9 PP_1215 Crossover junction endodeoxyribonuclease RuvC -0.20
    10 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) -0.20
    11 PP_4004 DNA translocase FtsK -0.20
    12 PP_0214 4-aminobutyrate aminotransferase -0.20
    13 PP_4124 NADH-quinone oxidoreductase subunit G -0.19
    14 PP_4942 conserved protein of unknown function -0.19
    15 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L -0.19
    16 PP_4941 conserved exported protein of unknown function -0.18
    17 PP_3531 conserved exported protein of unknown function -0.18
    18 PP_2319 conserved protein of unknown function -0.18
    19 PP_3503 Sigma-54 dependent transcriptional regulator -0.18
    20 PP_1318 Cytochrome b -0.18

    Or look for positive cofitness