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  • Negative cofitness for PP_0191 from Pseudomonas putida KT2440

    Transcriptional regulatory protein AlgQ
    SEED: Regulator of sigma D
    KEGG: regulator of sigma D

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2326 Universal stress protein -0.33
    2 PP_4685 conserved protein of unknown function -0.25
    3 PP_3662 conserved protein of unknown function -0.25
    4 PP_0129 GGDEF domain protein -0.24
    5 PP_4465 putative Porin -0.21
    6 PP_4246 Periplasmic binding protein -0.21
    7 PP_0351 putative Transmembrane sensor protein -0.20
    8 PP_3975 conserved protein of unknown function -0.20
    9 PP_1299 putative amino acid ABC transporter - membrane subunit -0.20
    10 PP_4956 putative acyltransferase -0.20
    11 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase -0.19
    12 PP_3693 putative Transcriptional regulator MvaT, P16 subunit -0.19
    13 PP_4999 dihydroorotase-like protein -0.19
    14 PP_4986 Channel protein, hemolysin III family -0.19
    15 PP_5392 conserved hypothetical protein containing WD40/YVTN repeat domain -0.19
    16 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer -0.19
    17 PP_0417 Anthranilate synthase component 1 -0.19
    18 PP_0703 putative Transmembrane sensor -0.19
    19 PP_0422 Indole-3-glycerol phosphate synthase -0.19
    20 PP_4723 Carbamoyl-phosphate synthase large chain -0.19

    Or look for positive cofitness