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  • Negative cofitness for PP_0178 from Pseudomonas putida KT2440

    putative efflux pump
    SEED: Membrane fusion component of tripartite multidrug resistance system

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0763 Medium-chain-fatty-acid CoA ligase -0.30
    2 PP_2326 Universal stress protein -0.24
    3 PP_2714 Sensor histidine kinase -0.19
    4 PP_1262 LysR family transcriptional regulator -0.17
    5 PP_0767 Transcriptional regulator, LuxR family -0.17
    6 PP_4515 Transcriptional regulator, MarR family -0.16
    7 PP_5195 putative Iron ABC transporter, permease protein -0.16
    8 PP_4430 putative threonine dehydratase -0.15
    9 PP_2049 Alcohol dehydrogenase, iron-containing -0.15
    10 PP_3049 conserved protein of unknown function -0.15
    11 PP_3949 HTH-type transcriptional repressor NicS -0.15
    12 PP_5092 putative exported NLP/P60 protein -0.14
    13 PP_1792 Glycosyl transferase, group 2 family protein -0.14
    14 PP_2680 aldehyde dehydrogenase -0.14
    15 PP_0506 putative ABC efflux transporter, permease protein -0.14
    16 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.14
    17 PP_5219 conserved membrane protein of unknown function -0.14
    18 PP_5384 copper sensor protein -0.14
    19 PP_2433 conserved protein of unknown function -0.14
    20 PP_5484 protein of unknown function -0.14

    Or look for positive cofitness