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  • Negative cofitness for PP_0166 from Pseudomonas putida KT2440

    HlyD family secretion protein
    SEED: Type I secretion system, membrane fusion protein LapC
    KEGG: membrane fusion protein LapC

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1725 conserved protein of unknown function -0.26
    2 PP_0362 Biotin synthase -0.23
    3 PP_0337 Sensory box protein -0.23
    4 PP_3731 Transcriptional regulator, TetR family -0.23
    5 PP_4270 conserved exported protein of unknown function -0.22
    6 PP_3787 conserved protein of unknown function -0.22
    7 PP_4164 Alpha/beta hydrolase -0.21
    8 PP_5109 membrane component of the ABC transporter FtsEX involved in cellular division -0.21
    9 PP_1422 conserved protein of unknown function -0.21
    10 PP_4979 putative Periplasmic binding protein -0.21
    11 PP_1009 glyceraldehyde-3-phosphate dehydrogenase -0.21
    12 PP_5347 pyruvate carboxylase subunit A -0.20
    13 PP_0292 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) -0.20
    14 PP_3790 diaminopimelate epimerase -0.20
    15 PP_5203 5-formyltetrahydrofolate cyclo-ligase -0.20
    16 PP_1067 Sensor histidine kinase -0.20
    17 PP_5346 pyruvate carboxylase subunit B -0.20
    18 PP_4482 Transcriptional regulator, AraC family -0.20
    19 PP_5348 Transcriptional regulator, LysR family -0.19
    20 PP_3786 aminotransferase -0.19

    Or look for positive cofitness