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  • Negative cofitness for PP_0157 from Pseudomonas putida KT2440

    transcriptional activator of gcdH, LysR family
    SEED: Chromosome initiation inhibitor

    Computing cofitness values with 995 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine -0.19
    2 PP_4398 Major facilitator family transporter -0.16
    3 PP_0878 dipeptide ABC transporter, binding subunit -0.16
    4 PP_0796 conserved protein of unknown function -0.16
    5 PP_3758 Response regulator/sensor histidine kinase -0.16
    6 PP_3722 Alanine racemase -0.16
    7 PP_3733 putative ABC transporter lipoprotein -0.16
    8 PP_2735 conserved protein of unknown function -0.15
    9 PP_3942 maleate isomerase -0.15
    10 PP_2684 conserved membrane protein of unknown function -0.15
    11 PP_2741 conserved membrane protein of unknown function -0.15
    12 PP_1522 major cold shock protein -0.15
    13 PP_0619 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein -0.15
    14 PP_0880 dipeptide ABC transporter - putative membrane subunit -0.15
    15 PP_0887 Sensor histidine kinase -0.15
    16 PP_0879 dipeptide ABC transporter - putative ATP binding subunit -0.15
    17 PP_1242 conserved protein of unknown function -0.15
    18 PP_0717 conserved membrane protein of unknown function, DUF2955 family -0.15
    19 PP_1057 Transcriptional regulator, PadR family -0.15
    20 PP_3605 Transcriptional regulator, LysR family -0.14

    Or look for positive cofitness